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Principal Investigator

Co-Principal Investigator

Meet up the task leaders

SYSTEM BIOLOGY. DEFINING A VIRTUAL GRAPEVINE PHENOTYPE FEATURE SPACE MODEL

INTEGRATIVE BIOLOGY. PHYSIOLOGICAL, TRANSCRIPTIONAL AND METABOLOMIC ASSESSMENT OF PLANTS’ PERFORMANCE

TECHNOLOGY AND ENGENEERING. COMBINING PHOTONICS SENSOR AND ROBOTICS

VITICULTURE: FIELD TESTS

FUSION INFORMATION AND VALIDATION OF OMICBOTS ENGINE PLATFORM

PhD students

Renan Tosin

Agrarian Sciences



Filipe Silva

Sustainable Chemistry

Nuno Ponte

Biology

Meet up the other members

Seeking for an opportunity? We are recruting!

PhD student

We are looking for a biological/Biosystems Engineer specialised in bioinformatics/systems biology to work in our Metabolomic Robots team for advanced crop diagnosis. This research is underpinned in non-invasive, 'in-vivo' and 'in-situ' digital crop phenotyping coupled with metabolomics and transcriptomics using our omic-robot for advanced precision agriculture. You can find an opportunity to join our disruptive research through a PhD based on an ongoing project OmicBots – High-Throughput Integrative Biology Omics Robots Platform for 'Next Generation Plant Physiology based Precision Viticulture.

The intended skills are:

  1. Education - Preferably a Master's level Degree in System Biology/Bioinformatics engineering or Biology/Biochemistry with formal competencies in bioinformatics. If the candidate comes from a Computer Science/data science background, a basic understanding of molecular and cellular Biology is crucial.

  2. Bioinformatics Tools - Understanding how biological systems (and their related components) work. Experience or willingness to learn a combination of programming languages: Python, R, Matlab, and tools designed explicitly for computational biology and bioinformatics like Biopython, Cobra. Sequence analysis tools – Blast, Bowtie, Clustal etc.

  3. Statistical skills - Proficiency in computational data analysis or modelling is expected. Ability to develop machine learning pipelines using tools like Tensorflow and Scikit-Learn. Knowledge of decision trees and hierarchical clustering can also be highly beneficial